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			</style>[an error occurred while processing this directive]<div class="content-width"><ol class="breadcrumb text-uppercase"><li><a href="/">Home</a></li><li><a href="/research/">Research</a></li><li><a href="/research/compbio/">Computational Biology and Health Informatics</a></li><li><a href="/research/compbio/projects.html">projects</a></li><li><a href="/projects/cancergrid/">CancerGrid</a></li><li class="active">Publications</li></ol></div><!-- MOBILE NAVIGATION --><div class="content-width space-below mobile-menu-placeholder visible-xs visible-sm"></div><!-- COLUMNS --><div class="container-fluid content-width"><div class="row"><div class="col-xs-12 col-md-9 col-md-push-3" id="maincontent"><!-- CONTENT (Column 2) --><div class="page-title"><h1>CancerGrid: Publications
</h1></div><div role="toolbar" class="btn-toolbar"><div class="btn-group"><a href="/projects/publications/date/cancergrid.html" aria-hidden="true" type="button" class="btn btn-default"><span class="glyphicon glyphicon-sort-by-attributes"></span> By date</a><a href="/projects/publications/title/cancergrid.html" aria-hidden="true" type="button" class="btn btn-oxford-blue"><span class="glyphicon glyphicon-sort-by-attributes"></span> By title</a><a href="/projects/publications/type/cancergrid.html" aria-hidden="true" type="button" class="btn btn-default"><span class="glyphicon glyphicon-sort-by-attributes"></span> By type</a><a href="/projects/publications/bibtex/cancergrid.html" aria-hidden="true" type="button" class="btn btn-default"><span class="glyphicon glyphicon-file"></span> BibTex</a></div></div><ul class="list-unbulleted list-unbulleted-spaced"><li>
	
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				[1] 
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		>
			
	
	<p class="publicationTitle"> <strong>
            A metadata approach for clinical data management in translational genomics studies in breast cancer </strong> </p>
	    <p class="publicationAuthors"> <em> James D Brenton Irene Papatheodorou Charles Crichton Lorna Morris Peter Maccallum Molecular Taxonomy of Breast Cancer International Consortium METABRIC Group Jim Davies and Carlos Caldas  </em> </p>
	
	<p class="publicationDetails"> 
            Vol. 2.
        2009.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication3367-abstract.html">
			Details <span class="sr-only" > about <em> A metadata approach for clinical data management in translational genomics studies in breast cancer  </em></span> </a> |
			<a href="/publications/publication3367.bib">
			BibTeX  <span class="sr-only" > data for <em> A metadata approach for clinical data management in translational genomics studies in breast cancer  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1186/1755-8794-2-66">
		DOI (10.1186/1755-8794-2-66)
		</a> 
		
		</div> 
	</div> 
	
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				[2] 
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	<p class="publicationTitle"> <strong>
            Client's Script Execution in Semantic Web Services </strong> </p>
	    <p class="publicationAuthors"> <em> I.V. Toujilov and S.B. Nagl  </em> </p>
	
	<p class="publicationDetails"> 
                Pages 247&#x2212;252.
            2006.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2817-abstract.html">
			Details <span class="sr-only" > about <em> Client's Script Execution in Semantic Web Services  </em></span> </a> |
			<a href="/publications/publication2817.bib">
			BibTeX  <span class="sr-only" > data for <em> Client's Script Execution in Semantic Web Services  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1109/INES.2006.1689378">
		DOI (10.1109/INES.2006.1689378)
		</a> 
		
		</div> 
	</div> 
	
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				[3] 
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	<p class="publicationTitle"> <strong>
            Cross&#x2212;Trial Query System for Cancer Clinical Trials </strong> </p>
	    <p class="publicationAuthors"> <em> Radu Calinescu&#x201a; Steve Harris&#x201a; Jeremy Gibbons and Jim Davies  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            IEEE International Conference on Systems&#x201a; Computing Sciences and Software Engineering</em>.
        December,
            2006.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2378-abstract.html">
			Details <span class="sr-only" > about <em> Cross&#x2212;Trial Query System for Cancer Clinical Trials  </em></span> </a> |
			<a href="/publications/publication2378.bib">
			BibTeX  <span class="sr-only" > data for <em> Cross&#x2212;Trial Query System for Cancer Clinical Trials  </em></span>   </a>
			
			
		
		</div> 
	</div> 
	
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				[4] 
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	<p class="publicationTitle"> <strong>
            Evolving Health Informatics: Semantic Frameworks and Metadata&#x2212;Driven Architectures </strong> </p>
	    <p class="publicationAuthors"> <em> Jim Davies&#x201a; Jeremy Gibbons&#x201a; Steve Harris and Denise Warzel  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            Microsoft eScience Workshop</em>.
        Indianapolis&#x201a; IN.
        2008.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2851-abstract.html">
			Details <span class="sr-only" > about <em> Evolving Health Informatics: Semantic Frameworks and Metadata&#x2212;Driven Architectures  </em></span> </a> |
			<a href="/publications/publication2851.bib">
			BibTeX  <span class="sr-only" > data for <em> Evolving Health Informatics: Semantic Frameworks and Metadata&#x2212;Driven Architectures  </em></span>   </a>
			
			
					| <a href="http://www.comlab.ox.ac.uk/people/jeremy.gibbons/publications/evolving.pdf"> Download (pdf)  <span class="sr-only" > of <em> Evolving Health Informatics: Semantic Frameworks and Metadata&#x2212;Driven Architectures  </em></span>   </a>
  				
		
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				[5] 
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	<p class="publicationTitle"> <strong>
            Form Follows Function: Model&#x2212;Driven Engineering for Clinical Trials </strong> </p>
	    <p class="publicationAuthors"> <em> Jim Davies&#x201a; Jeremy Gibbons&#x201a; Radu Calinescu&#x201a; Charles Crichton&#x201a; Steve Harris and Andrew Tsui  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            International Symposium on Foundations of Health Information Engineering and Systems</em>.
        
            Vol. 7151
                of LNCS.
        
                Pages 21&#x2212;38.
            Springer.
        August,
            2011.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication4600-abstract.html">
			Details <span class="sr-only" > about <em> Form Follows Function: Model&#x2212;Driven Engineering for Clinical Trials  </em></span> </a> |
			<a href="/publications/publication4600.bib">
			BibTeX  <span class="sr-only" > data for <em> Form Follows Function: Model&#x2212;Driven Engineering for Clinical Trials  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1007/978-3-642-32355-3_2">
		DOI (10.1007/978-3-642-32355-3_2)
		</a> 
					| <a href="http://www.comlab.ox.ac.uk/jeremy.gibbons/publications/fff.pdf"> Download (pdf)  <span class="sr-only" > of <em> Form Follows Function: Model&#x2212;Driven Engineering for Clinical Trials  </em></span>   </a>
  				
		
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				[6] 
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	<p class="publicationTitle"> <strong>
            Metadata&#x2212;Driven Software for Clinical Trials </strong> </p>
	    <p class="publicationAuthors"> <em> Charles Crichton&#x201a; Jim Davies&#x201a; Jeremy Gibbons&#x201a; Steve Harris&#x201a; Andrew Tsui and James Brenton  </em> </p>
	
	<p class="publicationDetails"> May,
            2009.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2865-abstract.html">
			Details <span class="sr-only" > about <em> Metadata&#x2212;Driven Software for Clinical Trials  </em></span> </a> |
			<a href="/publications/publication2865.bib">
			BibTeX  <span class="sr-only" > data for <em> Metadata&#x2212;Driven Software for Clinical Trials  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1109/SEHC.2009.5069600">
		DOI (10.1109/SEHC.2009.5069600)
		</a> 
					| <a href="http://www.comlab.ox.ac.uk/people/jeremy.gibbons/publications/consort.pdf"> Download (pdf)  <span class="sr-only" > of <em> Metadata&#x2212;Driven Software for Clinical Trials  </em></span>   </a>
  				
		
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				[7] 
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	<p class="publicationTitle"> <strong>
            Model&#x2212;Driven Architecture for Cancer Research </strong> </p>
	    <p class="publicationAuthors"> <em> Radu Calinescu&#x201a; Steve Harris&#x201a; Jeremy Gibbons&#x201a; Jim Davies&#x201a; Igor Toujilov and Sylvia Nagl  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            Software Engineering and Formal Methods</em>.
        
                Pages 59&#x2212;68.
            September,
            2007.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication1379-abstract.html">
			Details <span class="sr-only" > about <em> Model&#x2212;Driven Architecture for Cancer Research  </em></span> </a> |
			<a href="/publications/publication1379.bib">
			BibTeX  <span class="sr-only" > data for <em> Model&#x2212;Driven Architecture for Cancer Research  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1109/SEFM.2007.26">
		DOI (10.1109/SEFM.2007.26)
		</a> 
					| <a href="http://www.comlab.ox.ac.uk/jeremy.gibbons/publications/cgmda.pdf"> Download (pdf)  <span class="sr-only" > of <em> Model&#x2212;Driven Architecture for Cancer Research  </em></span>   </a>
  				
		
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	</div> 
	
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				[8] 
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		>
			
	
	<p class="publicationTitle"> <strong>
            Model&#x2212;Driven Architecture for Cancer Research </strong> </p>
	    <p class="publicationAuthors"> <em> R. Calinescu&#x201a; S. Harris&#x201a; J. Gibbons&#x201a; J. Davies&#x201a; I. Toujilov and S. Nagl  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            5th IEEE International Conference on Software Engineering and Formal Methods</em>.
        London&#x201a; UK.
        September,
            2007.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2379-abstract.html">
			Details <span class="sr-only" > about <em> Model&#x2212;Driven Architecture for Cancer Research  </em></span> </a> |
			<a href="/publications/publication2379.bib">
			BibTeX  <span class="sr-only" > data for <em> Model&#x2212;Driven Architecture for Cancer Research  </em></span>   </a>
			
			
		
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	</div> 
	
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				[9] 
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	<p class="publicationTitle"> <strong>
            Model&#x2212;Driven Support for a Vaccine Study in Kathmandu </strong> </p>
	    <p class="publicationAuthors"> <em> Jim Davies&#x201a; Jeremy Gibbons&#x201a; Steve Harris&#x201a; Jane Metz&#x201a; Andrew J. Pollard and Matthew Snape  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            Microsoft eScience Workshop</em>.
        October,
            2009.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication3340-abstract.html">
			Details <span class="sr-only" > about <em> Model&#x2212;Driven Support for a Vaccine Study in Kathmandu  </em></span> </a> |
			<a href="/publications/publication3340.bib">
			BibTeX  <span class="sr-only" > data for <em> Model&#x2212;Driven Support for a Vaccine Study in Kathmandu  </em></span>   </a>
			
			
					| <a href="http://www.comlab.ox.ac.uk/jeremy.gibbons/publications/vaccines.pdf"> Download (pdf)  <span class="sr-only" > of <em> Model&#x2212;Driven Support for a Vaccine Study in Kathmandu  </em></span>   </a>
  				
		
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	</div> 
	
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	<p class="publicationTitle"> <strong>
            Model&#x2212;based SOA Generation for Cancer Clinical Trials </strong> </p>
	    <p class="publicationAuthors"> <em> Radu Calinescu  </em> </p>
	
	<p class="publicationDetails"> 
            In Lars Arne Skar and Anders Aas Bjerkestrand, editors,
             
            <em>
            Best Practices and Methodologies in Service&#x2212;Oriented Architectures: Proceedings of the 4th OOPSLA Workshop on Service&#x2212;Oriented Architectures</em>.
        
                Pages 57&#x2212;71.
            Portland&#x201a; Oregon.
        2006.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2377-abstract.html">
			Details <span class="sr-only" > about <em> Model&#x2212;based SOA Generation for Cancer Clinical Trials  </em></span> </a> |
			<a href="/publications/publication2377.bib">
			BibTeX  <span class="sr-only" > data for <em> Model&#x2212;based SOA Generation for Cancer Clinical Trials  </em></span>   </a>
			
			
		
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	</div> 
	
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				[11] 
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	<p class="publicationTitle"> <strong>
            Reasoning in Semantic Web Services </strong> </p>
	    <p class="publicationAuthors"> <em> Igor Toujilov and Sylvia Nagl  </em> </p>
	
	<p class="publicationDetails"> Springer.
        2008.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2818-abstract.html">
			Details <span class="sr-only" > about <em> Reasoning in Semantic Web Services  </em></span> </a> |
			<a href="/publications/publication2818.bib">
			BibTeX  <span class="sr-only" > data for <em> Reasoning in Semantic Web Services  </em></span>   </a>
			
			
		
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	</div> 
	
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				[12] 
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	<p class="publicationTitle"> <strong>
            Semantic Frameworks for e&#x2212;Government </strong> </p>
	    <p class="publicationAuthors"> <em> Charles Crichton&#x201a; Jim Davies&#x201a; Jeremy Gibbons&#x201a; Steve Harris and Aadya Shukla  </em> </p>
	
	<p class="publicationDetails"> 
            In Theresa Pardo and Tomasz Janowski, editors,
             
            <em>
            First International Conference on Theory and Practice of Electronic Governance (ICEGOV) 2007</em>.
        
                Pages 30&#x2013;39.
            ACM.
        December,
            2007.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication1025-abstract.html">
			Details <span class="sr-only" > about <em> Semantic Frameworks for e&#x2212;Government  </em></span> </a> |
			<a href="/publications/publication1025.bib">
			BibTeX  <span class="sr-only" > data for <em> Semantic Frameworks for e&#x2212;Government  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1145/1328057.1328066">
		DOI (10.1145/1328057.1328066)
		</a> 
					| <a href="http://www.comlab.ox.ac.uk/jeremy.gibbons/publications/sf-egov.pdf"> Download (pdf)  <span class="sr-only" > of <em> Semantic Frameworks for e&#x2212;Government  </em></span>   </a>
  				
		
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				[13] 
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	<p class="publicationTitle"> <strong>
            The CancerGrid Experience: Metadata&#x2212;Based Model&#x2212;Driven Engineering for Clinical Trials </strong> </p>
	    <p class="publicationAuthors"> <em> Jim Davies&#x201a; Jeremy Gibbons&#x201a; Steve Harris and Charles Crichton  </em> </p>
	
	<p class="publicationDetails"> 
        In <em>Science of Computer Programming</em>.
        
            Vol. 89B.
        
                Pages 126&#x2212;143.
            September,
            2014.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication5947-abstract.html">
			Details <span class="sr-only" > about <em> The CancerGrid Experience: Metadata&#x2212;Based Model&#x2212;Driven Engineering for Clinical Trials  </em></span> </a> |
			<a href="/publications/publication5947.bib">
			BibTeX  <span class="sr-only" > data for <em> The CancerGrid Experience: Metadata&#x2212;Based Model&#x2212;Driven Engineering for Clinical Trials  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1016/j.scico.2013.02.010">
		DOI (10.1016/j.scico.2013.02.010)
		</a> 
					| <a href="http://www.comlab.ox.ac.uk/people/jeremy.gibbons/publications/cancergrid.pdf"> Download (pdf)  <span class="sr-only" > of <em> The CancerGrid Experience: Metadata&#x2212;Based Model&#x2212;Driven Engineering for Clinical Trials  </em></span>   </a>
  				
		
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	</div> 
	
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				[14] 
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		>
			
	
	<p class="publicationTitle"> <strong>
            WSRF&#x2212;Based Modeling of Clinical Trial Information for Collaborative Cancer Research </strong> </p>
	    <p class="publicationAuthors"> <em> Tianyi Zang&#x201a; Radu Calinescu&#x201a; Steve Harris&#x201a; Andrew Tsui&#x201a; Marta Kwiatkowska&#x201a; Jeremy Gibbons&#x201a; Jim Davies&#x201a; Peter Maccallum and Carlos Caldas  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            8th IEEE International Symposium on Cluster Computing (CCGrid)</em>.
        2008.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication1388-abstract.html">
			Details <span class="sr-only" > about <em> WSRF&#x2212;Based Modeling of Clinical Trial Information for Collaborative Cancer Research  </em></span> </a> |
			<a href="/publications/publication1388.bib">
			BibTeX  <span class="sr-only" > data for <em> WSRF&#x2212;Based Modeling of Clinical Trial Information for Collaborative Cancer Research  </em></span>   </a>
			
			 | <a
		href="http://dx.doi.org/10.1109/CCGRID.2008.57">
		DOI (10.1109/CCGRID.2008.57)
		</a> 
					| <a href="http://www.comlab.ox.ac.uk/jeremy.gibbons/publications/wsrfmodeling.pdf"> Download (pdf)  <span class="sr-only" > of <em> WSRF&#x2212;Based Modeling of Clinical Trial Information for Collaborative Cancer Research  </em></span>   </a>
  				
		
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	</div> 
	
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				[15] 
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	<p class="publicationTitle"> <strong>
            CancerGrid: Developing Open Standards for Clinical Cancer Informatics </strong> </p>
	    <p class="publicationAuthors"> <em> James Brenton&#x201a; Carlos Caldas&#x201a; Jim Davies&#x201a; Steve Harris and Peter Maccallum  </em> </p>
	
	<p class="publicationDetails"> 
            In  
            <em>
            All Hands Meeting</em>.
        2005.
        </p>
	
        		<p class="publicationlinks"> <a
        
            		href="/publications/publication2220-abstract.html">
			Details <span class="sr-only" > about <em> CancerGrid: Developing Open Standards for Clinical Cancer Informatics  </em></span> </a> |
			<a href="/publications/publication2220.bib">
			BibTeX  <span class="sr-only" > data for <em> CancerGrid: Developing Open Standards for Clinical Cancer Informatics  </em></span>   </a>
			
			
		
		</div> 
	</div> 
	
        </li></ul></div><div class="col-xs-12 col-md-3 col-md-pull-9 side-menu-col">[an error occurred while processing this directive]</div></div></div>[an error occurred while processing this directive]